Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine38-40 synthase | LY11_03909 | Not Available | Negative | 4508179 - 4508964 | 29197.0 |
| uncharacterized protein duf4293 | LY11_03910 | Not Available | Positive | 4509016 - 4509474 | 16717.0 |
| atp-dependent rna helicase dead | LY11_03911 | Not Available | Positive | 4509622 - 4511523 | 69821.6 |
| gamma-glutamyltranspeptidase/glutathione hydrolase | LY11_03912 | Not Available | Negative | 4511788 - 4513491 | 61299.4 |
| iron complex outermembrane receptor protein | LY11_03913 | Not Available | Negative | 4513602 - 4516463 | 103549.0 |
| hypothetical protein | LY11_03914 | Not Available | Negative | 4516587 - 4516904 | 11207.6 |
| glycerol-3-phosphate dehydrogenase (nad(p)+) | LY11_03915 | Not Available | Negative | 4517008 - 4517988 | 36522.2 |
| hlyd family secretion protein | LY11_03916 | Not Available | Negative | 4518082 - 4519434 | 48151.8 |
| outer membrane protein | LY11_03917 | Not Available | Negative | 4519459 - 4520865 | 51532.5 |
| peptidoglycan/xylan/chitin deacetylase (pgda/cda1 family) | LY11_03918 | Not Available | Positive | 4520949 - 4521566 | 23754.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

