Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 88 | LY11_00322 | Not Available | Negative | 369405 - 370610 | 45328.1 |
| chondroitin ac lyase | LY11_00323 | Not Available | Negative | 370642 - 372732 | 76833.5 |
| glycosyl hydrolase family 16 | LY11_00324 | Not Available | Negative | 372713 - 373495 | 29920.6 |
| putative outer membrane starch-binding protein | LY11_00325 | Not Available | Negative | 373496 - 375256 | 65589.2 |
| tonb-linked susc/raga family outer membrane protein | LY11_00326 | Not Available | Negative | 375268 - 378585 | 120115.0 |
| signal transduction histidine kinase | LY11_00327 | Not Available | Positive | 378782 - 382906 | 155199.0 |
| acs family hexuronate transporter-like mfs transporter | LY11_00328 | Not Available | Negative | 382970 - 384328 | 49811.6 |
| 2-dehydro-3-deoxyphosphogluconate aldolase/(4s)-4-hydroxy-2-oxoglutarate aldolase | LY11_00329 | Not Available | Negative | 384439 - 385098 | 24235.7 |
| 2-dehydro-3-deoxygluconokinase | LY11_00330 | Not Available | Negative | 385088 - 386107 | 37460.7 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | LY11_00331 | Not Available | Negative | 386112 - 386927 | 28629.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

