Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd-like starch-binding protein associating with outer membrane | LY11_03759 | Not Available | Negative | 4340988 - 4342574 | 59077.7 |
| tonb-linked susc/raga family outer membrane protein | LY11_03760 | Not Available | Negative | 4342669 - 4345950 | 120789.0 |
| dna-binding response ompr family regulator | LY11_03761 | Not Available | Positive | 4346290 - 4346994 | 27010.0 |
| signal transduction histidine kinase | LY11_03762 | Not Available | Positive | 4346991 - 4348361 | 51474.6 |
| gntr family transcriptional regulator/mocr family aminotransferase | LY11_03763 | Not Available | Negative | 4348612 - 4350090 | 55484.9 |
| paib family negative transcriptional regulator | LY11_03764 | Not Available | Positive | 4350177 - 4350782 | 23148.7 |
| ribosomal protein s18 acetylase rimi-like enzyme | LY11_03765 | Not Available | Positive | 4350784 - 4351302 | 20017.7 |
| rimj/riml family protein n-acetyltransferase | LY11_03766 | Not Available | Positive | 4351328 - 4351852 | 20136.2 |
| rna polymerase sigma-70 factor (ecf subfamily) | LY11_03767 | Not Available | Negative | 4351849 - 4352382 | 20657.6 |
| hypothetical protein | LY11_03768 | Not Available | Positive | 4353047 - 4353295 | 9956.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

