Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioesterase domain-containing protein | LY11_03729 | Not Available | Positive | 4306601 - 4307746 | 43048.6 |
| putative glucoamylase | LY11_03730 | Not Available | Positive | 4307758 - 4313643 | 220924.0 |
| surfactin synthase thioesterase subunit | LY11_03731 | Not Available | Positive | 4313691 - 4314386 | 25761.0 |
| lyttr family two component transcriptional regulator | LY11_03732 | Not Available | Negative | 4314395 - 4315093 | 26738.6 |
| transcriptional antiterminator rfah | LY11_03733 | Not Available | Positive | 4315379 - 4315909 | 20079.7 |
| outer membrane receptor protein involved in fe transport | LY11_03734 | Not Available | Negative | 4315945 - 4318377 | 89374.4 |
| hypothetical protein | LY11_03735 | Not Available | Negative | 4318412 - 4318750 | 12892.3 |
| rna polymerase sigma-70 factor (ecf subfamily) | LY11_03736 | Not Available | Positive | 4318864 - 4319412 | 21540.2 |
| hypothetical protein | LY11_03737 | Not Available | Positive | 4319416 - 4319865 | 16663.3 |
| histidine kinase | LY11_03738 | Not Available | Negative | 4319872 - 4321857 | 75694.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

