Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor (sigma-70 family) | LY11_03598 | Not Available | Negative | 4130791 - 4131597 | 31729.2 |
| hypothetical protein | LY11_03599 | Not Available | Negative | 4131607 - 4131756 | 5508.88 |
| hypothetical protein | LY11_03600 | Not Available | Positive | 4131940 - 4132446 | 19558.8 |
| putative transposase | LY11_03601 | Not Available | Positive | 4132674 - 4132940 | 10165.5 |
| putative transposase | LY11_03602 | Not Available | Positive | 4132952 - 4133136 | 7301.06 |
| istb-like atp binding protein | LY11_03603 | Not Available | Positive | 4133137 - 4133362 | 8135.7 |
| hypothetical protein | LY11_03604 | Not Available | Negative | 4133424 - 4134521 | 41757.3 |
| spasm domain peptide maturase of grasp-with-spasm system | LY11_03605 | Not Available | Negative | 4134549 - 4135556 | 38843.5 |
| hypothetical protein | LY11_03606 | Not Available | Negative | 4135546 - 4135740 | 6967.65 |
| atp-grasp peptide maturase of grasp-with-spasm system | LY11_03607 | Not Available | Negative | 4135742 - 4136725 | 37995.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

