Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nodt family efflux transporter outer membrane factor (omf) lipoprotein | LY11_00302 | Not Available | Negative | 345575 - 346957 | 50673.7 |
| hae1 family hydrophobic/amphiphilic exporter-1 | LY11_00303 | Not Available | Negative | 346981 - 350103 | 112920.0 |
| membrane fusion protein (multidrug efflux system) | LY11_00304 | Not Available | Negative | 350122 - 351261 | 40784.9 |
| hypothetical protein | LY11_00305 | Not Available | Negative | 351366 - 351722 | 13254.7 |
| dna-binding lrp family transcriptional regulator | LY11_00306 | Not Available | Negative | 351940 - 352428 | 18560.0 |
| emrb/qaca subfamily drug resistance transporter | LY11_00307 | Not Available | Positive | 352535 - 353947 | 50820.7 |
| dual-action heigh metallo-peptidase | LY11_00308 | Not Available | Negative | 354036 - 354791 | 26513.4 |
| hypothetical protein | LY11_00309 | Not Available | Negative | 354952 - 355491 | 20367.4 |
| inward rectifier potassium channel | LY11_00310 | Not Available | Negative | 355522 - 356463 | 35465.1 |
| fkbp-type peptidyl-prolyl cis-trans isomerase fkpa/fkbp-type peptidyl-prolyl cis-trans isomerase fklb | LY11_00311 | Not Available | Negative | 356745 - 357233 | 17368.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

