Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylulokinase | LY11_03558 | Not Available | Positive | 4084621 - 4086096 | 53824.5 |
| xylose isomerase | LY11_03559 | Not Available | Positive | 4086116 - 4087447 | 50056.6 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | LY11_03560 | Not Available | Positive | 4087540 - 4088304 | 27324.9 |
| helix-turn-helix protein | LY11_03561 | Not Available | Positive | 4088359 - 4089267 | 34842.0 |
| atp-dependent rna helicase rhle | LY11_03562 | Not Available | Negative | 4089340 - 4090476 | 41844.6 |
| hypothetical protein | LY11_03563 | Not Available | Positive | 4090609 - 4091580 | 37302.2 |
| uncharacterized membrane protein (duf4010 family) | LY11_03564 | Not Available | Negative | 4091591 - 4092877 | 45814.6 |
| hypothetical protein | LY11_03565 | Not Available | Positive | 4093133 - 4093579 | 17050.3 |
| putative mfs family arabinose efflux permease | LY11_03566 | Not Available | Negative | 4093698 - 4094834 | 40905.6 |
| hxlr family transcriptional regulator | LY11_03567 | Not Available | Positive | 4094878 - 4095300 | 16493.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

