Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein ydei (yjbr/cyay-like superfamily) | LY11_03308 | Not Available | Negative | 3813237 - 3813818 | 22414.2 |
| trimethylamine monooxygenase | LY11_03309 | Not Available | Negative | 3813959 - 3815305 | 52059.1 |
| tetr family transcriptional regulator | LY11_03310 | Not Available | Positive | 3815683 - 3816273 | 22816.7 |
| catechol 2,3-dioxygenase-like lactoylglutathione lyase family enzyme | LY11_03311 | Not Available | Positive | 3816317 - 3816712 | 14920.0 |
| outer membrane protein ompa-like peptidoglycan-associated protein | LY11_03312 | Not Available | Positive | 3816875 - 3818233 | 47079.7 |
| muramoyltetrapeptide carboxypeptidase | LY11_03313 | Not Available | Negative | 3818297 - 3819325 | 37597.1 |
| uncharacterized protein (tigr00290 family) | LY11_03314 | Not Available | Negative | 3819333 - 3820073 | 28382.8 |
| hypothetical protein | LY11_03315 | Not Available | Negative | 3820081 - 3820689 | 23014.5 |
| cobalt-zinc-cadmium efflux system membrane fusion protein | LY11_03316 | Not Available | Negative | 3820775 - 3821923 | 42414.3 |
| cobalt-zinc-cadmium resistance protein czca | LY11_03317 | Not Available | Negative | 3821946 - 3826307 | 161223.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

