Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LY11_03268 | Not Available | Negative | 3769349 - 3770074 | 27231.7 |
| rna polymerase sigma-70 factor (ecf subfamily) | LY11_03269 | Not Available | Negative | 3770160 - 3770720 | 21974.4 |
| transketolase | LY11_03270 | Not Available | Negative | 3770724 - 3771680 | 34411.4 |
| transketolase | LY11_03271 | Not Available | Negative | 3771743 - 3772588 | 30834.5 |
| peroxiredoxin q/bcp | LY11_03272 | Not Available | Negative | 3772833 - 3773294 | 16928.2 |
| peptidase m23-like protein | LY11_03273 | Not Available | Negative | 3773297 - 3775018 | 63435.6 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase in catechol pathway | LY11_03274 | Not Available | Negative | 3775024 - 3775635 | 22749.3 |
| putative secreted protein (por secretion system target) | LY11_03275 | Not Available | Negative | 3775763 - 3776281 | 19015.2 |
| outer membrane protein with beta-barrel domain | LY11_03276 | Not Available | Positive | 3776648 - 3777505 | 32501.2 |
| peptidase s41-like protein | LY11_03277 | Not Available | Positive | 3777530 - 3778744 | 45240.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

