Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | LY11_03258 | Not Available | Negative | 3758193 - 3759557 | 51615.9 |
| dna-binding response ompr family regulator | LY11_03259 | Not Available | Negative | 3759557 - 3760240 | 25379.2 |
| aspartyl protease | LY11_03260 | Not Available | Negative | 3760287 - 3760724 | 16228.9 |
| malate dehydrogenase (nad) | LY11_03261 | Not Available | Negative | 3760724 - 3761662 | 32877.1 |
| apolipoprotein d and lipocalin family protein | LY11_03262 | Not Available | Positive | 3761894 - 3762382 | 18772.5 |
| dna polymerase-3 subunit alpha | LY11_03263 | Not Available | Positive | 3762499 - 3766932 | 166903.0 |
| thioredoxin | LY11_03264 | Not Available | Positive | 3767005 - 3767322 | 11547.0 |
| hypothetical protein | LY11_03265 | Not Available | Negative | 3767413 - 3767934 | 19190.8 |
| uncharacterized protein duf58 | LY11_03266 | Not Available | Positive | 3767975 - 3768895 | 35196.9 |
| hypothetical protein | LY11_03267 | Not Available | Negative | 3768896 - 3769339 | 17475.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

