Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd-like starch-binding protein associating with outer membrane | LY11_03095 | Not Available | Negative | 3597040 - 3598548 | 56121.4 |
| tonb-linked susc/raga family outer membrane protein | LY11_03096 | Not Available | Negative | 3598553 - 3601978 | 127047.0 |
| fecr family protein | LY11_03097 | Not Available | Negative | 3602156 - 3603283 | 41924.7 |
| rna polymerase sigma-70 factor (ecf subfamily) | LY11_03098 | Not Available | Negative | 3603393 - 3603971 | 22791.1 |
| outer membrane receptor protein involved in fe transport | LY11_03099 | Not Available | Negative | 3604099 - 3606504 | 89808.6 |
| sensor histidine kinase yesm | LY11_03100 | Not Available | Positive | 3606614 - 3608281 | 63953.6 |
| lyttr family two component transcriptional regulator | LY11_03101 | Not Available | Positive | 3608278 - 3608979 | 26458.6 |
| hypothetical protein | LY11_03102 | Not Available | Negative | 3608985 - 3610691 | 63488.3 |
| yqge family putative transporter | LY11_03103 | Not Available | Negative | 3610717 - 3612012 | 47993.3 |
| putative gh43/duf377 family glycosyl hydrolase | LY11_03104 | Not Available | Negative | 3612005 - 3613054 | 38655.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

