Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase family wbsx | LY11_03025 | Not Available | Negative | 3507153 - 3508259 | 40772.7 |
| hypothetical protein | LY11_03026 | Not Available | Negative | 3508263 - 3509318 | 40516.3 |
| hypothetical protein | LY11_03027 | Not Available | Negative | 3509275 - 3510522 | 46709.5 |
| hypothetical protein | LY11_03028 | Not Available | Negative | 3510506 - 3511741 | 46416.2 |
| had superfamily hydrolase (tigr01549 family) | LY11_03029 | Not Available | Negative | 3511738 - 3512370 | 24215.1 |
| 3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase) | LY11_03030 | Not Available | Negative | 3512354 - 3513091 | 27895.6 |
| 4-hydroxy 2-oxovalerate aldolase | LY11_03031 | Not Available | Negative | 3513091 - 3514632 | 58417.9 |
| capsular exopolysaccharide synthesis family protein | LY11_03032 | Not Available | Negative | 3514639 - 3516996 | 87883.9 |
| polysaccharide export outer membrane protein | LY11_03033 | Not Available | Negative | 3517022 - 3517831 | 29205.3 |
| tyrosine-protein phosphatase ywqe | LY11_03034 | Not Available | Negative | 3517999 - 3518727 | 27880.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

