Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative outer membrane starch-binding protein | LY11_02965 | Not Available | Negative | 3424604 - 3426505 | 69796.9 |
| tonb-linked susc/raga family outer membrane protein | LY11_02966 | Not Available | Negative | 3426510 - 3429689 | 118991.0 |
| signal transduction histidine kinase | LY11_02967 | Not Available | Positive | 3429910 - 3433104 | 121329.0 |
| helix-turn-helix protein | LY11_02968 | Not Available | Positive | 3433089 - 3433916 | 30830.5 |
| gxgyxy motif-containing protein | LY11_02969 | Not Available | Negative | 3433999 - 3436026 | 74368.4 |
| hypothetical protein | LY11_02970 | Not Available | Positive | 3436416 - 3437072 | 24569.6 |
| hypothetical protein | LY11_02971 | Not Available | Positive | 3437111 - 3438073 | 36449.7 |
| hypothetical protein | LY11_02972 | Not Available | Positive | 3438172 - 3438966 | 28771.1 |
| istb-like atp binding protein | LY11_02973 | Not Available | Negative | 3439112 - 3439304 | 6969.28 |
| two-component system cheb/cher fusion protein | LY11_02974 | Not Available | Negative | 3439341 - 3441902 | 96325.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

