Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix protein | LY11_02905 | Not Available | Positive | 3329433 - 3329981 | 20843.1 |
| tonb-like protein | LY11_02906 | Not Available | Negative | 3330001 - 3331296 | 47272.4 |
| rna polymerase sigma-70 factor (ecf subfamily) | LY11_02907 | Not Available | Negative | 3331283 - 3331861 | 22797.5 |
| ca-activated chloride channel family protein | LY11_02908 | Not Available | Positive | 3331964 - 3333835 | 68207.8 |
| gntr family transcriptional regulator/mocr family aminotransferase | LY11_02909 | Not Available | Negative | 3333913 - 3335379 | 54927.9 |
| fmn-dependent nadh-azoreductase | LY11_02910 | Not Available | Positive | 3335702 - 3336337 | 23641.3 |
| uncharacterized protein with tbp-like fold duf4468 | LY11_02911 | Not Available | Negative | 3336541 - 3337194 | 24621.5 |
| crp-like camp-binding protein | LY11_02912 | Not Available | Positive | 3337913 - 3338497 | 22199.4 |
| hypothetical protein | LY11_02913 | Not Available | Positive | 3338567 - 3339169 | 22920.0 |
| uncharacterized protein yndb with ahsa1/start domain | LY11_02914 | Not Available | Negative | 3339313 - 3339810 | 19078.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

