Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LY11_02895 | Not Available | Negative | 3315597 - 3316457 | 33601.0 |
| integrase-like protein | LY11_02896 | Not Available | Negative | 3316550 - 3316820 | 10274.4 |
| transposase | LY11_02897 | Not Available | Negative | 3316821 - 3317090 | 10418.7 |
| phospholipase c | LY11_02898 | Not Available | Positive | 3317176 - 3319425 | 85784.2 |
| carboxypeptidase family protein | LY11_02899 | Not Available | Positive | 3319428 - 3322706 | 121829.0 |
| methylamine utilization protein maue | LY11_02900 | Not Available | Positive | 3322868 - 3323347 | 18021.2 |
| hypothetical protein | LY11_02901 | Not Available | Positive | 3323359 - 3323646 | 10426.4 |
| ahpc/tsa family protein | LY11_02902 | Not Available | Negative | 3323710 - 3324327 | 22902.0 |
| susd-like starch-binding protein associating with outer membrane | LY11_02903 | Not Available | Negative | 3324317 - 3325702 | 52372.3 |
| tonb-linked susc/raga family outer membrane protein | LY11_02904 | Not Available | Negative | 3325715 - 3328915 | 119084.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

