Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ix secretion system porp/sprf family membrane protein | LY11_02865 | Not Available | Positive | 3282250 - 3283266 | 38185.4 |
| hypothetical protein | LY11_02866 | Not Available | Positive | 3283366 - 3283713 | 12940.6 |
| signal transduction histidine kinase | LY11_02867 | Not Available | Positive | 3283810 - 3285879 | 79132.5 |
| sss family transporter | LY11_02868 | Not Available | Negative | 3285876 - 3287573 | 62703.3 |
| lmbe family n-acetylglucosaminyl deacetylase | LY11_02869 | Not Available | Negative | 3287713 - 3290142 | 89697.4 |
| hypothetical protein | LY11_02870 | Not Available | Negative | 3290232 - 3290834 | 21665.8 |
| putative oxidoreductase | LY11_02871 | Not Available | Negative | 3290889 - 3291326 | 15774.0 |
| tetr family transcriptional regulator | LY11_02872 | Not Available | Negative | 3291399 - 3292001 | 22881.9 |
| alkylated dna repair dioxygenase alkb | LY11_02873 | Not Available | Negative | 3292148 - 3292774 | 24327.1 |
| dnaj-like protein | LY11_02874 | Not Available | Negative | 3292982 - 3293428 | 16962.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

