Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxygen-independent coproporphyrinogen-3 oxidase | LY11_02855 | Not Available | Negative | 3254238 - 3255602 | 51608.8 |
| d-isomer specific 2-hydroxyacid dehydrogenase-like protein | LY11_02856 | Not Available | Negative | 3255592 - 3256050 | 16544.7 |
| crp-like camp-binding protein | LY11_02857 | Not Available | Negative | 3256134 - 3257198 | 40468.0 |
| pas domain s-box-containing protein | LY11_02858 | Not Available | Negative | 3257217 - 3258401 | 44707.6 |
| hypothetical protein | LY11_02859 | Not Available | Negative | 3258447 - 3258773 | 11655.7 |
| hypothetical protein | LY11_02860 | Not Available | Positive | 3258939 - 3260747 | 67937.6 |
| putative membrane protein | LY11_02861 | Not Available | Negative | 3260857 - 3261471 | 21902.4 |
| protein of unknown function (duf2911) | LY11_02862 | Not Available | Positive | 3261585 - 3262436 | 30952.3 |
| putative repeat protein (tigr01451 family) | LY11_02863 | Not Available | Positive | 3262940 - 3265627 | 90797.5 |
| putative repeat protein (tigr01451 family)/gliding motility-associated-like protein | LY11_02864 | Not Available | Positive | 3265611 - 3282194 | 547661.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

