Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | LY11_02804 | Not Available | Positive | 3202238 - 3203233 | 37418.3 |
| outer membrane receptor protein involved in fe transport | LY11_02805 | Not Available | Positive | 3203274 - 3205814 | 95664.1 |
| hypothetical protein | LY11_02806 | Not Available | Positive | 3205816 - 3206649 | 31310.3 |
| thioredoxin | LY11_02807 | Not Available | Negative | 3206768 - 3207064 | 10967.6 |
| dinb family protein | LY11_02808 | Not Available | Negative | 3207179 - 3207646 | 17749.2 |
| sugar phosphate permease | LY11_02809 | Not Available | Negative | 3207672 - 3208841 | 42596.6 |
| g/u mismatch-specific uracil-dna glycosylase | LY11_02810 | Not Available | Negative | 3208896 - 3209408 | 19643.6 |
| hypothetical protein | LY11_02811 | Not Available | Positive | 3209527 - 3210360 | 31435.6 |
| yxwgxw repeat-containing protein | LY11_02812 | Not Available | Negative | 3210443 - 3211501 | 39215.0 |
| rna polymerase sigma-70 factor (ecf subfamily) | LY11_02813 | Not Available | Negative | 3211620 - 3212237 | 23525.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

