Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix protein | LY11_02794 | Not Available | Negative | 3194241 - 3195080 | 32309.5 |
| hypothetical protein | LY11_02795 | Not Available | Positive | 3195333 - 3195572 | 9260.0 |
| trna(fmet)-specific endonuclease vapc | LY11_02796 | Not Available | Positive | 3195572 - 3195973 | 15463.7 |
| ketosteroid isomerase-like protein | LY11_02797 | Not Available | Negative | 3196044 - 3196418 | 14099.8 |
| prephenate dehydrogenase (nadp+) | LY11_02798 | Not Available | Positive | 3196650 - 3197912 | 47709.2 |
| signal transduction histidine kinase | LY11_02799 | Not Available | Positive | 3197923 - 3199140 | 45325.3 |
| putative methyltransferase (tigr04325 family) | LY11_02800 | Not Available | Positive | 3199251 - 3200051 | 30357.0 |
| hypothetical protein | LY11_02801 | Not Available | Positive | 3200044 - 3201072 | 39992.2 |
| hypothetical protein | LY11_02802 | Not Available | Positive | 3201122 - 3201604 | 17502.4 |
| rna polymerase sigma-70 factor (ecf subfamily) | LY11_02803 | Not Available | Positive | 3201612 - 3202217 | 23512.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

