Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homospermidine synthase (spermidine-specific) | LY11_02764 | Not Available | Negative | 3165069 - 3166049 | 36927.3 |
| hypothetical protein | LY11_02765 | Not Available | Positive | 3166283 - 3166621 | 12970.5 |
| surface antigen-like protein | LY11_02766 | Not Available | Positive | 3166712 - 3167842 | 42575.7 |
| putative o-methyltransferase yrrm | LY11_02767 | Not Available | Negative | 3167839 - 3168621 | 29913.0 |
| transglutaminase superfamily protein | LY11_02768 | Not Available | Positive | 3168666 - 3169535 | 33690.2 |
| acetyl esterase/lipase | LY11_02769 | Not Available | Negative | 3169532 - 3170461 | 33488.2 |
| peptide chain release factor 2 | LY11_02770 | Not Available | Negative | 3170461 - 3171375 | 34687.1 |
| hypothetical protein | LY11_02771 | Not Available | Negative | 3171610 - 3172113 | 17206.2 |
| glucose-6-phosphate isomerase | LY11_02772 | Not Available | Positive | 3172296 - 3173942 | 61376.9 |
| uncharacterized protein duf4251 | LY11_02773 | Not Available | Positive | 3174088 - 3174624 | 19519.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

