Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ahpd family alkylhydroperoxidase | LY11_00221 | Not Available | Negative | 244194 - 244631 | 16290.5 |
| crp-like camp-binding protein | LY11_00222 | Not Available | Negative | 244762 - 245337 | 22969.2 |
| hpp family protein | LY11_00223 | Not Available | Negative | 245365 - 245958 | 22064.4 |
| putative alpha-1,2-mannosidase | LY11_00224 | Not Available | Negative | 246041 - 248305 | 85547.4 |
| putative outer membrane starch-binding protein | LY11_00225 | Not Available | Negative | 248317 - 250119 | 66939.8 |
| tonb-linked susc/raga family outer membrane protein | LY11_00226 | Not Available | Negative | 250132 - 253422 | 120584.0 |
| fecr family protein | LY11_00227 | Not Available | Negative | 253758 - 254951 | 44649.8 |
| rna polymerase sigma-70 factor (ecf subfamily) | LY11_00228 | Not Available | Negative | 255042 - 255638 | 22695.7 |
| pas domain s-box-containing protein | LY11_00229 | Not Available | Positive | 255936 - 257126 | 46203.5 |
| hypothetical protein | LY11_00230 | Not Available | Negative | 257209 - 257877 | 25721.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

