Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnase hii | LY11_02704 | Not Available | Negative | 3101416 - 3102027 | 22431.1 |
| peptide/nickel transport system permease protein | LY11_02705 | Not Available | Negative | 3102049 - 3103158 | 40439.2 |
| cellulose synthase/poly-beta-1,6-n-acetylglucosamine synthase-like glycosyltransferase | LY11_02706 | Not Available | Negative | 3103158 - 3104294 | 42561.1 |
| hypothetical protein | LY11_02707 | Not Available | Negative | 3104272 - 3105249 | 37959.9 |
| holliday junction endonuclease ruvc | LY11_02708 | Not Available | Positive | 3105295 - 3105858 | 20435.2 |
| hypothetical protein | LY11_02709 | Not Available | Positive | 3105889 - 3106533 | 23951.5 |
| hypothetical protein | LY11_02710 | Not Available | Negative | 3106607 - 3106822 | 7845.83 |
| 5'-nucleotidase (lipoprotein e(p4) family) | LY11_02711 | Not Available | Negative | 3106908 - 3107693 | 29439.8 |
| f-type h+-transporting atpase subunit gamma | LY11_02712 | Not Available | Negative | 3107809 - 3108690 | 32411.9 |
| f-type h+-transporting atpase subunit alpha | LY11_02713 | Not Available | Negative | 3108747 - 3110321 | 56457.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

