Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase | LY11_02674 | Not Available | Negative | 3062591 - 3064600 | 73351.3 |
| glycosyl hydrolase family 18 (putative chitinase) | LY11_02675 | Not Available | Negative | 3064760 - 3065713 | 34042.2 |
| alpha-glucosidase | LY11_02676 | Not Available | Positive | 3066023 - 3067993 | 74221.2 |
| xaa-pro aminopeptidase | LY11_02677 | Not Available | Negative | 3067983 - 3069335 | 49569.6 |
| rna polymerase sigma-70 factor (ecf subfamily) | LY11_02678 | Not Available | Positive | 3070041 - 3070583 | 21074.4 |
| fecr family protein | LY11_02679 | Not Available | Positive | 3070652 - 3071611 | 36142.7 |
| tonb-linked susc/raga family outer membrane protein | LY11_02680 | Not Available | Positive | 3071697 - 3075080 | 123466.0 |
| putative outer membrane starch-binding protein | LY11_02681 | Not Available | Positive | 3075101 - 3076624 | 56540.8 |
| alkaline phosphatase | LY11_02682 | Not Available | Positive | 3076639 - 3078483 | 68126.9 |
| bleomycin hydrolase | LY11_02683 | Not Available | Positive | 3078603 - 3079709 | 40907.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

