Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LY11_02633 | Not Available | Negative | 3007242 - 3008150 | 33473.0 |
| two-component system response regulator mtra | LY11_02634 | Not Available | Positive | 3008193 - 3008558 | 13831.7 |
| acetylornithine/succinyldiaminopimelate/ putresci ne aminotransferase | LY11_02635 | Not Available | Negative | 3008614 - 3009798 | 43371.1 |
| signal transduction histidine kinase | LY11_02636 | Not Available | Negative | 3009898 - 3011163 | 48711.5 |
| dna-binding response ompr family regulator | LY11_02637 | Not Available | Negative | 3011211 - 3011885 | 25444.7 |
| nadh dehydrogenase | LY11_02638 | Not Available | Negative | 3011882 - 3013162 | 47543.6 |
| anhydro-n-acetylmuramic acid kinase | LY11_02639 | Not Available | Negative | 3013270 - 3014463 | 42474.0 |
| type iv secretory pathway virj component | LY11_02640 | Not Available | Negative | 3014594 - 3016027 | 52371.5 |
| phosphatidylglycerol lysyltransferase | LY11_02641 | Not Available | Negative | 3016036 - 3018630 | 97565.1 |
| putative mfs family arabinose efflux permease | LY11_02642 | Not Available | Negative | 3018723 - 3019952 | 44903.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

