Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LY11_02563 | Not Available | Positive | 2924779 - 2925090 | 11032.5 |
| gas vesicle protein | LY11_02564 | Not Available | Negative | 2925162 - 2925596 | 15627.3 |
| putative membrane protein ypha (doxx/surf4 family) | LY11_02565 | Not Available | Negative | 2925818 - 2926270 | 16724.0 |
| hypothetical protein | LY11_02566 | Not Available | Positive | 2926418 - 2926765 | 13948.5 |
| glycosyl hydrolase family 63 | LY11_02567 | Not Available | Positive | 2926818 - 2929442 | 100789.0 |
| glutamate 5-kinase | LY11_02568 | Not Available | Positive | 2929477 - 2930553 | 38763.3 |
| glutamate-5-semialdehyde dehydrogenase | LY11_02569 | Not Available | Positive | 2930601 - 2931845 | 45662.8 |
| malate dehydrogenase (quinone) | LY11_02570 | Not Available | Positive | 2932043 - 2933548 | 55091.4 |
| kdo2-lipid iv(a) lauroyltransferase | LY11_02571 | Not Available | Negative | 2933576 - 2934451 | 34204.1 |
| lrp/asnc family leucine-responsive transcriptional regulator/lrp/asnc family transcriptional regulator | LY11_02572 | Not Available | Negative | 2934603 - 2935064 | 17444.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

