Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna threonylcarbamoyladenosine biosynthesis protein tsab | LY11_00201 | Not Available | Negative | 225544 - 226230 | 24512.5 |
| ribonuclease p protein component | LY11_00202 | Not Available | Negative | 226492 - 227004 | 19516.0 |
| lyttr family two component transcriptional regulator | LY11_00203 | Not Available | Negative | 227300 - 228034 | 27776.8 |
| histidine kinase | LY11_00204 | Not Available | Negative | 228031 - 229074 | 39550.6 |
| cell wall-active antibiotic response 4tms protein yvqf | LY11_00205 | Not Available | Negative | 229086 - 229919 | 31076.4 |
| putative iron-regulated protein | LY11_00206 | Not Available | Positive | 230067 - 230921 | 31991.5 |
| large conductance mechanosensitive channel | LY11_00207 | Not Available | Negative | 231005 - 231454 | 16355.4 |
| rna polymerase rpon-/sigl-like sigma 54 subunit | LY11_00208 | Not Available | Positive | 231629 - 233101 | 56571.1 |
| response regulator receiver domain-containing protein | LY11_00209 | Not Available | Negative | 233180 - 233647 | 17899.6 |
| thif family protein | LY11_00210 | Not Available | Positive | 233776 - 234942 | 43393.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

