Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc family leucine-responsive transcriptional regulator | LY11_00191 | Not Available | Negative | 213800 - 214270 | 17941.2 |
| dtxr family iron (metal) dependent repressor | LY11_00192 | Not Available | Positive | 214408 - 215073 | 24836.0 |
| manganese transport protein | LY11_00193 | Not Available | Positive | 215096 - 216958 | 67843.4 |
| ssra-binding protein | LY11_00194 | Not Available | Positive | 217040 - 217489 | 17467.3 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | LY11_00195 | Not Available | Negative | 217491 - 218147 | 24474.6 |
| hypothetical protein | LY11_00196 | Not Available | Positive | 218426 - 219151 | 27154.5 |
| replication restart dna helicase pria | LY11_00197 | Not Available | Negative | 219071 - 221551 | 93884.9 |
| uncharacterized membrane protein ygdd (tmem256/duf423 family) | LY11_00198 | Not Available | Negative | 221552 - 221938 | 14334.8 |
| hypothetical protein | LY11_00199 | Not Available | Positive | 222511 - 224091 | 59894.6 |
| hypothetical protein | LY11_00200 | Not Available | Positive | 224143 - 225543 | 52727.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

