Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LY11_02382 | Not Available | Positive | 2736017 - 2736439 | 16181.9 |
| is605 orfb family transposase | LY11_02383 | Not Available | Negative | 2738522 - 2739604 | 42056.0 |
| rna polymerase sigma factor (sigma-70 family) | LY11_02384 | Not Available | Negative | 2739624 - 2740415 | 31220.3 |
| helix-turn-helix protein | LY11_02385 | Not Available | Positive | 2740657 - 2741076 | 16105.0 |
| dna-binding xre family transcriptional regulator | LY11_02386 | Not Available | Positive | 2741113 - 2741520 | 15210.1 |
| is4 transposase | LY11_02387 | Not Available | Positive | 2742505 - 2743740 | 47803.2 |
| Trna-val | Not Available | Not Available | Positive | 2744022 - 2744096 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 2744136 - 2744213 | Not Available |
| dna replication and repair protein reco | LY11_02390 | Not Available | Negative | 2744318 - 2745043 | 27954.0 |
| undecaprenol kinase/diacylglycerol kinase (atp) | LY11_02391 | Not Available | Negative | 2745045 - 2745392 | 12438.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

