Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine aminopeptidase s33 family | LY11_02342 | Not Available | Negative | 2696446 - 2697213 | 28707.4 |
| trna pseudouridine65 synthase | LY11_02343 | Not Available | Negative | 2697249 - 2698010 | 29688.3 |
| hypothetical protein | LY11_02344 | Not Available | Positive | 2698372 - 2698740 | 13728.1 |
| hypothetical protein | LY11_02345 | Not Available | Positive | 2698780 - 2699301 | 20136.2 |
| nudix domain-containing protein | LY11_02346 | Not Available | Positive | 2699358 - 2700095 | 28682.4 |
| nodt family efflux transporter outer membrane factor (omf) lipoprotein | LY11_02347 | Not Available | Negative | 2700099 - 2701505 | 51345.0 |
| hae1 family hydrophobic/amphiphilic exporter-1 | LY11_02348 | Not Available | Negative | 2701534 - 2704737 | 115534.0 |
| membrane fusion protein (multidrug efflux system) | LY11_02349 | Not Available | Negative | 2704744 - 2705907 | 41023.1 |
| tetr family transcriptional regulator | LY11_02350 | Not Available | Negative | 2705961 - 2706554 | 23251.3 |
| lysophospholipase l1-like esterase | LY11_02351 | Not Available | Negative | 2706953 - 2707624 | 25807.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

