Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formylglycine-generating enzyme required for sulfatase activity | LY11_02322 | Not Available | Negative | 2667490 - 2668449 | 35705.3 |
| putative outer membrane starch-binding protein | LY11_02323 | Not Available | Negative | 2668452 - 2670335 | 70615.9 |
| tonb-linked susc/raga family outer membrane protein | LY11_02324 | Not Available | Negative | 2670361 - 2673807 | 127165.0 |
| fecr family protein | LY11_02325 | Not Available | Negative | 2673976 - 2674989 | 38826.5 |
| rna polymerase sigma-70 factor (ecf subfamily) | LY11_02326 | Not Available | Negative | 2675123 - 2675689 | 21732.8 |
| hypothetical protein | LY11_02327 | Not Available | Negative | 2675789 - 2676310 | 19807.0 |
| putative mfs family arabinose efflux permease | LY11_02328 | Not Available | Negative | 2676519 - 2677940 | 51540.8 |
| hxlr family transcriptional regulator | LY11_02329 | Not Available | Positive | 2678052 - 2678435 | 14554.5 |
| sugar phosphate permease | LY11_02330 | Not Available | Positive | 2678496 - 2679755 | 44614.3 |
| endonuclease g | LY11_02331 | Not Available | Positive | 2679923 - 2681311 | 48840.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

