Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LY11_02262 | Not Available | Positive | 2611117 - 2611467 | 13228.0 |
| abc transporter transmembrane protein | LY11_02263 | Not Available | Positive | 2611520 - 2612527 | 37793.0 |
| multidrug resistance efflux pump | LY11_02264 | Not Available | Positive | 2612520 - 2613875 | 50649.9 |
| outer membrane efflux protein | LY11_02265 | Not Available | Positive | 2613884 - 2614705 | 30898.3 |
| outer membrane efflux protein | LY11_02266 | Not Available | Positive | 2614725 - 2615318 | 22776.5 |
| dihydrofolate reductase | LY11_02267 | Not Available | Negative | 2615475 - 2616011 | 19951.1 |
| helix-turn-helix protein | LY11_02268 | Not Available | Negative | 2616076 - 2616795 | 27301.8 |
| chlorophyllase-like protein | LY11_02269 | Not Available | Negative | 2616901 - 2617854 | 34680.0 |
| hxlr family transcriptional regulator | LY11_02270 | Not Available | Positive | 2617925 - 2618332 | 15565.4 |
| hypothetical protein | LY11_02271 | Not Available | Positive | 2618528 - 2619013 | 18187.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

