Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component regulator with propeller domain | LY11_00171 | Not Available | Positive | 194738 - 197686 | 112589.0 |
| hypothetical protein | LY11_00172 | Not Available | Positive | 198114 - 198314 | 7714.22 |
| hypothetical protein | LY11_00173 | Not Available | Positive | 198393 - 199514 | 43334.8 |
| helix-turn-helix protein | LY11_00174 | Not Available | Negative | 199598 - 199927 | 12526.2 |
| udp-n-acetylmuramate: l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase | LY11_00175 | Not Available | Negative | 199956 - 201308 | 50898.5 |
| ribosomal protein l11 methyltransferase | LY11_00176 | Not Available | Negative | 201353 - 202192 | 31554.4 |
| triosephosphate isomerase | LY11_00177 | Not Available | Negative | 202192 - 202953 | 27452.7 |
| udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase | LY11_00178 | Not Available | Negative | 203078 - 204253 | 42944.1 |
| large subunit ribosomal protein l31 | LY11_00179 | Not Available | Negative | 204380 - 204628 | 9736.6 |
| hypothetical protein | LY11_00180 | Not Available | Negative | 204723 - 205010 | 11107.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

