Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LY11_02172 | Not Available | Positive | 2525375 - 2525797 | 15503.8 |
| heme exporter protein b | LY11_02173 | Not Available | Positive | 2525911 - 2526570 | 24433.0 |
| heme exporter protein c | LY11_02174 | Not Available | Positive | 2526696 - 2527355 | 24886.7 |
| hypothetical protein | LY11_02175 | Not Available | Positive | 2527505 - 2527711 | 7647.87 |
| glutamate dehydrogenase (nad(p)+) | LY11_02176 | Not Available | Positive | 2527876 - 2529297 | 51840.2 |
| peptide-methionine (s)-s-oxide reductase | LY11_02177 | Not Available | Positive | 2529439 - 2530098 | 24969.6 |
| cytochrome c-type biogenesis protein ccme | LY11_02178 | Not Available | Positive | 2530386 - 2530796 | 15516.6 |
| cytochrome c-type biogenesis protein ccmf | LY11_02179 | Not Available | Positive | 2530802 - 2533270 | 92623.4 |
| putative short-subunit dehydrogenase-like oxidoreductase (duf2520 family) | LY11_02180 | Not Available | Positive | 2533310 - 2534074 | 27451.0 |
| 2fe-2s ferredoxin | LY11_02181 | Not Available | Positive | 2534114 - 2534446 | 11986.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

