Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiopeptide-type bacteriocin biosynthesis protein | LY11_02090 | Not Available | Positive | 2434444 - 2435355 | 35183.5 |
| lanthionine synthetase-like protein | LY11_02091 | Not Available | Positive | 2435367 - 2437319 | 74020.4 |
| hypothetical protein | LY11_02092 | Not Available | Negative | 2437375 - 2437566 | 6911.16 |
| integrase-like protein | LY11_02093 | Not Available | Negative | 2437890 - 2438129 | 9135.18 |
| pdz domain-containing protein | LY11_02095 | Not Available | Negative | 2438338 - 2439600 | 47148.6 |
| gliding motility-associated-like protein | LY11_02097 | Not Available | Negative | 2440061 - 2443624 | 123113.0 |
| hypothetical protein | LY11_02098 | Not Available | Negative | 2443982 - 2444344 | 13334.1 |
| glyceraldehyde 3-phosphate dehydrogenase | LY11_02099 | Not Available | Positive | 2444464 - 2445519 | 38277.9 |
| acetyltransferase (gnat) family protein | LY11_02100 | Not Available | Positive | 2445512 - 2445949 | 16135.2 |
| phosphoglycerate kinase | LY11_02101 | Not Available | Positive | 2446026 - 2447219 | 42989.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

