Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative outer membrane starch-binding protein | LY11_02060 | Not Available | Negative | 2396724 - 2398529 | 68048.0 |
| tonb-linked susc/raga family outer membrane protein | LY11_02061 | Not Available | Negative | 2398534 - 2402073 | 131334.0 |
| fecr family protein | LY11_02062 | Not Available | Negative | 2402219 - 2403352 | 42193.2 |
| rna polymerase sigma-70 factor (ecf subfamily) | LY11_02063 | Not Available | Negative | 2403432 - 2404010 | 22590.6 |
| phosphoserine aminotransferase | LY11_02064 | Not Available | Positive | 2404270 - 2405358 | 40258.2 |
| uncharacterized protein (duf1015 family) | LY11_02065 | Not Available | Positive | 2405345 - 2406520 | 44547.7 |
| acetyltransferase (gnat) family protein | LY11_02066 | Not Available | Positive | 2406715 - 2407308 | 22018.6 |
| acetylornithine deacetylase | LY11_02067 | Not Available | Positive | 2407324 - 2408454 | 42281.4 |
| fhs family l-fucose permease-like mfs transporter | LY11_02068 | Not Available | Positive | 2408646 - 2409890 | 44617.9 |
| l-fuconolactonase | LY11_02069 | Not Available | Positive | 2409946 - 2410779 | 31533.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

