Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb family protein | LY11_02050 | Not Available | Negative | 2385055 - 2386029 | 36856.5 |
| calcineurin-like phosphoesterase family protein | LY11_02051 | Not Available | Positive | 2386300 - 2389905 | 136456.0 |
| rimj/riml family protein n-acetyltransferase | LY11_02052 | Not Available | Positive | 2389960 - 2390556 | 22860.2 |
| hypothetical protein | LY11_02053 | Not Available | Negative | 2390639 - 2391610 | 36506.4 |
| ycei-like domain-containing protein | LY11_02054 | Not Available | Negative | 2391647 - 2392216 | 21252.6 |
| hypothetical protein | LY11_02055 | Not Available | Negative | 2392247 - 2392603 | 12576.3 |
| putative lipoprotein with yx(fwy)xxd motif | LY11_02056 | Not Available | Negative | 2392636 - 2393457 | 28839.6 |
| rna polymerase sigma-70 factor (ecf subfamily) | LY11_02057 | Not Available | Positive | 2393815 - 2394297 | 18296.7 |
| hypothetical protein | LY11_02058 | Not Available | Positive | 2394368 - 2395705 | 47994.8 |
| 3',5'-cyclic amp phosphodiesterase cpda | LY11_02059 | Not Available | Negative | 2395736 - 2396650 | 35116.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

