Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane receptor protein involved in fe transport | LY11_02000 | Not Available | Positive | 2318609 - 2321041 | 88226.4 |
| peptide/nickel transport system substrate-binding protein | LY11_02001 | Not Available | Negative | 2321091 - 2322749 | 63143.9 |
| iron complex transport system substrate-binding protein | LY11_02002 | Not Available | Positive | 2322768 - 2323223 | 17011.5 |
| nad(p)h-dependent fmn reductase | LY11_02003 | Not Available | Negative | 2323220 - 2323741 | 19401.4 |
| chromosome partitioning protein | LY11_02004 | Not Available | Positive | 2323921 - 2324724 | 29446.7 |
| parb family chromosome partitioning protein | LY11_02005 | Not Available | Positive | 2324735 - 2325652 | 34240.2 |
| hypothetical protein | LY11_02006 | Not Available | Positive | 2325652 - 2326269 | 22657.7 |
| dihydrodipicolinate reductase | LY11_02007 | Not Available | Positive | 2326313 - 2327053 | 27498.8 |
| signal peptidase i | LY11_02008 | Not Available | Positive | 2327062 - 2328255 | 45446.5 |
| ldh2 family malate/lactate/ureidoglycolate dehydrogenase | LY11_02009 | Not Available | Negative | 2328326 - 2329408 | 38875.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

