Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein duf490 | LY11_01980 | Not Available | Negative | 2292732 - 2297135 | 163753.0 |
| n6-l-threonylcarbamoyladenine synthase | LY11_01981 | Not Available | Positive | 2297252 - 2298253 | 36180.9 |
| hypothetical protein | LY11_01982 | Not Available | Positive | 2298312 - 2298491 | 6776.83 |
| recombination protein reca | LY11_01983 | Not Available | Negative | 2298568 - 2299581 | 36392.2 |
| dna-(apurinic or apyrimidinic site) lyase /endonuclease iii | LY11_01984 | Not Available | Negative | 2299706 - 2300374 | 24987.4 |
| hypothetical protein | LY11_01985 | Not Available | Negative | 2300436 - 2300633 | 7489.84 |
| rna polymerase sigma-70 factor (ecf subfamily) | LY11_01986 | Not Available | Negative | 2300823 - 2301398 | 22490.4 |
| excinuclease abc subunit a | LY11_01987 | Not Available | Positive | 2301665 - 2304478 | 104067.0 |
| threonine/homoserine/homoserine lactone efflux protein | LY11_01988 | Not Available | Positive | 2304559 - 2305179 | 23157.1 |
| peptidase s41-like protein | LY11_01989 | Not Available | Negative | 2305593 - 2307035 | 54824.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

