Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3',5'-cyclic amp phosphodiesterase cpda | LY11_01970 | Not Available | Positive | 2279144 - 2279989 | 31706.7 |
| rna polymerase sigma-70 factor (ecf subfamily) | LY11_01971 | Not Available | Positive | 2280135 - 2280671 | 21110.7 |
| fecr family protein | LY11_01972 | Not Available | Positive | 2280802 - 2281767 | 36717.8 |
| tonb-linked susc/raga family outer membrane protein | LY11_01973 | Not Available | Positive | 2281887 - 2285450 | 129173.0 |
| putative outer membrane starch-binding protein | LY11_01974 | Not Available | Positive | 2285476 - 2286999 | 56081.2 |
| putative alpha-1,2-mannosidase | LY11_01975 | Not Available | Positive | 2287081 - 2289138 | 77203.4 |
| Trna-met | Not Available | Not Available | Positive | 2289343 - 2289416 | Not Available |
| hypothetical protein | LY11_01977 | Not Available | Positive | 2289521 - 2289901 | 15009.7 |
| lipopolysaccharide export system permease protein | LY11_01978 | Not Available | Positive | 2290022 - 2291389 | 51205.9 |
| 3,4-dihydroxy 2-butanone 4-phosphate synthase/gtp cyclohydrolase ii | LY11_01979 | Not Available | Positive | 2291537 - 2292748 | 43956.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

