Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | LY11_01960 | Not Available | Negative | 2268100 - 2268693 | 22581.1 |
| phosphonatase-like hydrolase | LY11_01961 | Not Available | Negative | 2268767 - 2269447 | 25432.7 |
| type i phosphodiesterase/nucleotide pyrophosphatase | LY11_01962 | Not Available | Negative | 2269536 - 2270432 | 32231.2 |
| ca2+:h+ antiporter | LY11_01963 | Not Available | Positive | 2270597 - 2271679 | 37815.1 |
| acetyl esterase/lipase | LY11_01964 | Not Available | Negative | 2271803 - 2272747 | 33867.8 |
| hypothetical protein | LY11_01965 | Not Available | Negative | 2272759 - 2273400 | 25252.1 |
| arac family transcriptional regulator of adaptative response/methylated-dna-[protein]-cysteine methyltransferase | LY11_01966 | Not Available | Negative | 2273405 - 2274010 | 22606.2 |
| rna polymerase sigma-70 factor (ecf subfamily) | LY11_01967 | Not Available | Positive | 2274114 - 2274698 | 22852.6 |
| fecr family protein | LY11_01968 | Not Available | Positive | 2274742 - 2275767 | 38357.5 |
| carboxypeptidase family protein | LY11_01969 | Not Available | Positive | 2275864 - 2279091 | 118661.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

