Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had superfamily hydrolase (tigr01509 family) | LY11_01889 | Not Available | Positive | 2185763 - 2186422 | 24518.4 |
| lrp/asnc family leucine-responsive transcriptional regulator | LY11_01890 | Not Available | Positive | 2186604 - 2187089 | 17970.2 |
| drug/metabolite transporter (dmt)-like permease | LY11_01891 | Not Available | Positive | 2187113 - 2188075 | 34843.2 |
| biopolymer transport protein exbd | LY11_01892 | Not Available | Negative | 2188149 - 2188667 | 18933.1 |
| hypothetical protein | LY11_01893 | Not Available | Negative | 2188912 - 2189220 | 9938.46 |
| outer membrane beta-barrel protein | LY11_01894 | Not Available | Positive | 2189537 - 2189761 | 8918.64 |
| n-acetylmuramoyl-l-alanine amidase | LY11_01895 | Not Available | Positive | 2189876 - 2190748 | 32263.8 |
| pas domain s-box-containing protein | LY11_01896 | Not Available | Negative | 2190787 - 2192676 | 71944.3 |
| dual-action heigh metallo-peptidase | LY11_01897 | Not Available | Positive | 2192935 - 2193816 | 31156.9 |
| arac-like dna-binding protein | LY11_01898 | Not Available | Negative | 2194160 - 2195041 | 33693.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

