Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hae1 family hydrophobic/amphiphilic exporter-1 | LY11_01778 | Not Available | Positive | 2034304 - 2035248 | 34470.9 |
| hae1 family hydrophobic/amphiphilic exporter-1 | LY11_01779 | Not Available | Positive | 2035305 - 2037428 | 76451.7 |
| hypothetical protein | LY11_01780 | Not Available | Positive | 2037446 - 2038468 | 38056.0 |
| cation diffusion facilitator family transporter | LY11_01781 | Not Available | Negative | 2038488 - 2039381 | 32609.5 |
| hypothetical protein | LY11_01782 | Not Available | Positive | 2039432 - 2040196 | 28805.5 |
| two-component system cheb/cher fusion protein | LY11_01783 | Not Available | Positive | 2040328 - 2041299 | 36937.5 |
| pas domain s-box-containing protein | LY11_01784 | Not Available | Positive | 2041352 - 2044090 | 102622.0 |
| arac-like dna-binding protein | LY11_01785 | Not Available | Positive | 2044588 - 2045460 | 33235.2 |
| trna (cmo5u34)-methyltransferase | LY11_01786 | Not Available | Positive | 2045572 - 2046249 | 25939.8 |
| pimeloyl-acp methyl ester carboxylesterase | LY11_01787 | Not Available | Negative | 2046350 - 2047477 | 42400.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

