Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | LY11_01768 | Not Available | Positive | 2024846 - 2025610 | 27055.3 |
| arac-like dna-binding protein | LY11_01769 | Not Available | Positive | 2025647 - 2026573 | 36045.3 |
| hypothetical protein | LY11_01770 | Not Available | Negative | 2026606 - 2026989 | 14232.3 |
| helix-turn-helix protein | LY11_01771 | Not Available | Negative | 2026990 - 2027448 | 17778.2 |
| short subunit dehydrogenase | LY11_01772 | Not Available | Negative | 2027840 - 2028364 | 18829.8 |
| hypothetical protein | LY11_01773 | Not Available | Negative | 2028477 - 2029541 | 38817.5 |
| histidine kinase | LY11_01774 | Not Available | Positive | 2029923 - 2030936 | 39130.7 |
| lyttr family two component transcriptional regulator | LY11_01775 | Not Available | Positive | 2030933 - 2031694 | 29507.6 |
| outer membrane protein tolc | LY11_01776 | Not Available | Positive | 2031883 - 2033190 | 49176.6 |
| rnd family efflux transporter mfp subunit | LY11_01777 | Not Available | Positive | 2033233 - 2034294 | 38617.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

