Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pectinesterase | LY11_01728 | Not Available | Positive | 1981714 - 1982712 | 37428.4 |
| altronate hydrolase | LY11_01729 | Not Available | Positive | 1982702 - 1984354 | 59606.2 |
| laci family transcriptional regulator | LY11_01730 | Not Available | Negative | 1984356 - 1985366 | 38060.6 |
| pectate lyase-like protein | LY11_01731 | Not Available | Positive | 1985550 - 1987100 | 56955.7 |
| unsaturated rhamnogalacturonyl hydrolase | LY11_01732 | Not Available | Positive | 1987107 - 1988312 | 45773.9 |
| glucuronate isomerase | LY11_01733 | Not Available | Positive | 1988345 - 1989745 | 54125.0 |
| acyl-coa reductase-like nad-dependent aldehyde dehydrogenase | LY11_01734 | Not Available | Positive | 1989840 - 1991465 | 60091.7 |
| tonb-linked susc/raga family outer membrane protein | LY11_01735 | Not Available | Positive | 1991708 - 1994671 | 109047.0 |
| putative outer membrane starch-binding protein | LY11_01736 | Not Available | Positive | 1994688 - 1996322 | 60622.1 |
| pectate lyase | LY11_01737 | Not Available | Negative | 1996530 - 1997645 | 38986.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

