Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor (ecf subfamily) | LY11_00111 | Not Available | Negative | 132993 - 133577 | 22494.2 |
| hypothetical protein | LY11_00112 | Not Available | Positive | 134007 - 134705 | 25285.7 |
| permuted papain-like amidase yaef/yiix c92 family enzyme | LY11_00113 | Not Available | Positive | 134713 - 135345 | 23574.7 |
| polyphosphate glucokinase | LY11_00114 | Not Available | Positive | 135554 - 136330 | 28655.2 |
| 6-phosphogluconate dehydrogenase | LY11_00115 | Not Available | Positive | 136320 - 137732 | 52140.6 |
| glucose-6-phosphate 1-dehydrogenase | LY11_00116 | Not Available | Positive | 137812 - 139326 | 57481.9 |
| 6-phosphogluconolactonase | LY11_00117 | Not Available | Positive | 139328 - 140053 | 26602.7 |
| hypothetical protein | LY11_00118 | Not Available | Negative | 140086 - 140283 | 7628.68 |
| flavin-dependent dehydrogenase | LY11_00119 | Not Available | Positive | 140407 - 141540 | 42214.8 |
| methyltransferase family protein | LY11_00120 | Not Available | Positive | 141540 - 142253 | 27250.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

