Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramoyl-l-alanine amidase | LY11_01597 | Not Available | Negative | 1829742 - 1830584 | 31481.0 |
| hypothetical protein | LY11_01598 | Not Available | Positive | 1831093 - 1833876 | 103701.0 |
| nicotinamide-nucleotide amidase | LY11_01599 | Not Available | Positive | 1833886 - 1835133 | 45158.7 |
| 2-oxoglutarate dehydrogenase e2 component (dihydrolipoamide succinyltransferase) | LY11_01600 | Not Available | Positive | 1835192 - 1836562 | 49239.0 |
| hypothetical protein | LY11_01601 | Not Available | Positive | 1836684 - 1836995 | 11239.4 |
| ribonuclease | LY11_01602 | Not Available | Positive | 1837105 - 1837503 | 14375.0 |
| homoserine dehydrogenase | LY11_01603 | Not Available | Negative | 1837588 - 1838829 | 46257.5 |
| homoserine o-acetyltransferase | LY11_01604 | Not Available | Negative | 1838830 - 1839888 | 39379.9 |
| o-acetylhomoserine (thiol)-lyase | LY11_01605 | Not Available | Negative | 1839915 - 1841231 | 47783.4 |
| cystathionine gamma-synthase | LY11_01607 | Not Available | Negative | 1841753 - 1842868 | 40143.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

