Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | LY11_01577 | Not Available | Positive | 1808339 - 1809628 | 48900.0 |
| putative mate family efflux protein | LY11_01578 | Not Available | Negative | 1809637 - 1811064 | 50780.6 |
| acyl-coa thioester hydrolase/thioesterase-3 | LY11_01579 | Not Available | Negative | 1811151 - 1811570 | 16272.5 |
| small subunit ribosomal protein s15 | LY11_01580 | Not Available | Positive | 1811698 - 1812003 | 11478.1 |
| polyribonucleotide nucleotidyltransferase | LY11_01581 | Not Available | Positive | 1812120 - 1814264 | 77783.6 |
| abc-type antimicrobial peptide transport system permease subunit | LY11_01582 | Not Available | Negative | 1814339 - 1816705 | 87691.5 |
| ribulose-phosphate 3-epimerase | LY11_01583 | Not Available | Positive | 1816972 - 1817646 | 24115.6 |
| phosphoserine aminotransferase | LY11_01584 | Not Available | Positive | 1817733 - 1818800 | 39364.6 |
| d-3-phosphoglycerate dehydrogenase | LY11_01585 | Not Available | Positive | 1818807 - 1819757 | 34017.2 |
| uncharacterized protein (duf1015 family) | LY11_01586 | Not Available | Positive | 1819783 - 1821024 | 46758.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

