Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hae1 family hydrophobic/amphiphilic exporter-1 | LY11_00101 | Not Available | Negative | 115744 - 118935 | 115526.0 |
| membrane fusion protein (multidrug efflux system) | LY11_00102 | Not Available | Negative | 118947 - 120080 | 40389.9 |
| tetr family transcriptional regulator | LY11_00103 | Not Available | Negative | 120296 - 120895 | 23096.0 |
| hypothetical protein | LY11_00104 | Not Available | Negative | 121123 - 121656 | 20053.3 |
| hypothetical protein | LY11_00105 | Not Available | Positive | 121724 - 124090 | 90060.2 |
| uncharacterized protein duf4302 | LY11_00106 | Not Available | Negative | 124211 - 125485 | 46747.6 |
| substrate import-associated zinc metallohydrolase lipoprotein | LY11_00107 | Not Available | Negative | 125516 - 126361 | 31353.7 |
| susd-like starch-binding protein associating with outer membrane | LY11_00108 | Not Available | Negative | 126401 - 127873 | 54255.3 |
| tonb-linked susc/raga family outer membrane protein | LY11_00109 | Not Available | Negative | 127889 - 131479 | 133016.0 |
| fecr family protein | LY11_00110 | Not Available | Negative | 131732 - 132928 | 44159.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

