Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (adenine2503-c2)-methyltransferase | LY11_01477 | Not Available | Positive | 1678052 - 1679113 | 40196.2 |
| comf family protein | LY11_01478 | Not Available | Positive | 1679152 - 1679844 | 26228.3 |
| pas domain s-box-containing protein | LY11_01479 | Not Available | Negative | 1680116 - 1682890 | 104517.0 |
| glycine hydroxymethyltransferase | LY11_01480 | Not Available | Negative | 1682910 - 1684181 | 46104.7 |
| 1-deoxy-d-xylulose-5-phosphate synthase | LY11_01481 | Not Available | Positive | 1684710 - 1686638 | 70504.6 |
| glucosamine--fructose-6-phosphate aminotransferase (isomerizing) | LY11_01482 | Not Available | Negative | 1686723 - 1688561 | 67865.1 |
| hypothetical protein | LY11_01483 | Not Available | Positive | 1688919 - 1689230 | 11029.3 |
| prc-barrel domain protein | LY11_01484 | Not Available | Positive | 1689589 - 1690284 | 25872.3 |
| signal transduction histidine kinase | LY11_01485 | Not Available | Positive | 1690436 - 1691314 | 33765.9 |
| hypothetical protein | LY11_01486 | Not Available | Positive | 1691406 - 1691936 | 17971.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

