Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron complex outermembrane receptor protein | LY11_01457 | Not Available | Negative | 1647192 - 1649669 | 90934.9 |
| carboxypeptidase family protein | LY11_01458 | Not Available | Negative | 1650063 - 1652894 | 103347.0 |
| vanz family protein | LY11_01459 | Not Available | Negative | 1653169 - 1653573 | 15764.7 |
| glycine cleavage system h protein | LY11_01460 | Not Available | Negative | 1653576 - 1653956 | 13671.0 |
| cell surface protein spra | LY11_01461 | Not Available | Negative | 1654182 - 1661357 | 269644.0 |
| holliday junction dna helicase subunit ruva | LY11_01462 | Not Available | Negative | 1661389 - 1661973 | 21134.9 |
| malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+) | LY11_01463 | Not Available | Negative | 1661980 - 1664295 | 84263.6 |
| membrane-bound lytic murein transglycosylase d | LY11_01464 | Not Available | Negative | 1664542 - 1665870 | 49896.0 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit a | LY11_01465 | Not Available | Negative | 1665915 - 1667345 | 51741.9 |
| sec-independent protein translocase protein tata | LY11_01466 | Not Available | Negative | 1667385 - 1667585 | 7068.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

